Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq14 152 1e-31
seq1563 140 8e-28
seq3289 87.8 4e-12
seq2619 87.8 4e-12
>seq14
Length=1339370
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| ||||| || |||||||| |||| ||||||||||| ||| || | || |||
Sbjct 521504 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGGCCGTCT 521563
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| || | ||||||||||||| ||||||||| |||
Sbjct 521564 TCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTATCC 521623
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || ||| | |||||| | | || || ||||| ||||| |||
Sbjct 521624 TGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCGACCTCCAAAGTGATGGTC 521683
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || |||||||| || ||
Sbjct 521684 TTACCAGTCAGGGTCTTCACAAAGATCTG 521712
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| ||||| || |||||||| |||| ||||||||||| | || | ||||||
Sbjct 521048 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 521107
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| |||||||||||||||||||| ||| |||||||| |||
Sbjct 521108 TCCAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCTGGAGGGATTCCTTCCTTATCC 521167
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || ||| |||| |||||| | | || || |||| ||||| |||
Sbjct 521168 TGGATCTTGGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTC 521227
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 521228 TTGCCAGTCAGGGTCTTCACGAAGATCTG 521256
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| ||||| || |||||||| |||| ||||||||| | | || | || |||
Sbjct 521276 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 521335
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || || ||||| || | ||||||||| ||| |||||||| |||
Sbjct 521336 TCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGGATTCCTTCCTTGTCC 521395
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| |||
Sbjct 521396 TGGATCTTAGCCTTGACGTTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 521455
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 521456 TTGCCAGTCAGGGTCTTCACGAAGATCTG 521484
>seq1563
Length=18910200
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5355788 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5355847
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5355848 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5355907
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || || | |||||| ||| || || |||| ||||| ||
Sbjct 5355908 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTGATGGT 5355967
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||| ||||| || ||
Sbjct 5355968 CTTGCCAGTGAGGGTTTTGACAAAGATCTG 5355997
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5356700 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356759
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| | | ||||||||| || ||| ||||| ||
Sbjct 5356760 TTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356819
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || || | ||| || ||| || || |||| ||||| ||
Sbjct 5356820 CTGGATCTTGGCCTTGACATTCTCAATGGTATCGCTTGGCTCGACCTCCAGGGTGATGGT 5356879
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 5356880 CTTGCCTGTGAGGGTTTTCACAAAGATCTG 5356909
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5357156 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5357215
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5357216 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5357275
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | ||| || | | || || || | ||||| ||
Sbjct 5357276 CTGGATCTTGGCTTTCACGTTCTCAATGGTATCGCTGGGCTCAACCTCAAGGGTGATGGT 5357335
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 5357336 CTTGCCAGTGAGGGTTTTCACAAAGATCTG 5357365
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| || ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5350605 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5350664
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5350665 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5350724
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| || | |||||| | | ||| || |||| ||||| ||
Sbjct 5350725 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTGATGGT 5350784
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || || || || ||
Sbjct 5350785 CTTGCCGGTGAGGGTCTTGACGAAGATCTG 5350814
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| || ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5351061 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5351120
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5351121 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5351180
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| |||||| ||| || |||| |||||| ||| || || || | ||||| ||
Sbjct 5351181 CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGT 5351240
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || ||||| || ||
Sbjct 5351241 CTTGCCAGTGAGGGTCTTGACAAAGATCTG 5351270
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5356016 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356075
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| ||||| ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5356076 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356135
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || || | |||||| | | ||| || |||| ||||| ||
Sbjct 5356136 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCAACCTCCAGGGTGATGGT 5356195
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 5356196 CTTGCCAGTAAGGGTCTTGACAAAGATCTG 5356225
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| || ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5356244 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356303
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5356304 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356363
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| || | |||||| ||| || || |||| ||||| ||
Sbjct 5356364 CTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGCTCAACCTCCAGGGTGATGGT 5356423
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || || || || ||
Sbjct 5356424 CTTGCCGGTGAGGGTCTTGACGAAGATCTG 5356453
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| || ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5350833 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5350892
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5350893 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5350952
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | |||||| ||| || || |||| ||||| ||
Sbjct 5350953 CTGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTTGGCTCAACCTCCAGGGTGATGGT 5351012
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || ||||| || ||
Sbjct 5351013 CTTGCCTGTAAGGGTCTTGACAAAGATCTG 5351042
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| || ||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 5356472 CAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 5356531
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5356532 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5356591
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || || | |||||| ||| || || |||| ||||| ||
Sbjct 5356592 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCGACCTCCAGGGTGATGGT 5356651
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || || || || ||
Sbjct 5356652 CTTGCCAGTGAGGGTCTTGACGAAGATCTG 5356681
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||| ||||| || |||||||| |||| |||||||||| | || | |||||
Sbjct 5356928 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTGCGGCCATC 5356987
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 5356988 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 5357047
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || || | |||||| ||| || || || | ||||| ||
Sbjct 5357048 CTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGT 5357107
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || || ||||| || ||
Sbjct 5357108 CTTGCCTGTGAGGGTCTTGACAAAGATCTG 5357137
>seq3289
Length=18717
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/90 (82%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| |||| ||||||||||| || || | |||||| |||||||| || || ||||||
Sbjct 9031 CCTTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCCTCCAGCTGTTTGCCAGCGAAG 9090
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| |||||||||||||| || |||||||
Sbjct 9091 ATCAGACGCTGCTGGTCAGGGGGAATTCCT 9120
>seq2619
Length=386543
Score = 87.8 bits (96), Expect = 4e-12
Identities = 74/90 (82%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||| |||| ||||||||||| || || | |||||| |||||||| || || ||||||
Sbjct 17900 CCTTTCTGGATGTTGTAGTCAGACAGTGTGCGTCCATCCTCCAGCTGTTTGCCAGCGAAG 17841
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|| |||||||||||||| || |||||||
Sbjct 17840 ATCAGACGCTGCTGGTCAGGGGGAATTCCT 17811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178864080415136
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