Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1563 140 4e-28 seq14 138 1e-27 >seq1563 Length=18910200 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| || ||||| | || |||||| ||||| |||||||| || Sbjct 5356686 CCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5356745 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||||||||| || ||||| | ||||||||| | || Sbjct 5356746 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGA 5356805 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| ||||| || | | || ||||| | || || Sbjct 5356806 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCGCTTGGCTCGACC 5356865 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 5356866 TCCAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 5356912 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| || ||||| | || |||||| ||||| |||||||| || Sbjct 5355774 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5355833 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 5355834 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5355893 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| ||||| || | | |||||||| | || || Sbjct 5355894 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACC 5355953 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 5355954 TCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 5356000 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| || ||||| | || |||||| ||||| |||||||| || Sbjct 5356002 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5356061 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||||||||| || |||| | ||||||||| | || Sbjct 5356062 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5356121 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| ||||| || | | ||||| || | ||| || Sbjct 5356122 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTCAACC 5356181 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| || || || || |||||||| ||||| Sbjct 5356182 TCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 5356228 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| |||||||| | || |||||| ||||| |||||||| | Sbjct 5356456 TGCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 5356515 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 5356516 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGG 5356575 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||||| || | | |||||||| | || | Sbjct 5356576 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCGA 5356635 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 5356636 CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5356684 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| || ||||| | || |||||| |||||||||||||| | Sbjct 5356912 TGCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCAG 5356971 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 5356972 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGG 5357031 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||||| || | | |||||||| | || | Sbjct 5357032 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAA 5357091 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||| || || || || |||||||| ||||| Sbjct 5357092 CCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 5357140 Score = 129 bits (142), Expect = 7e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||||| || || || | ||||| |||||||| | || |||||| ||||| ||||| Sbjct 5350584 TTATTGACCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTA 5350643 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || || ||||| | || || ||||||||||| || || |||| | ||||||||| Sbjct 5350644 GTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTC 5350703 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539 | || | || ||||||||| |||||| ||| | || | | ||||| || | Sbjct 5350704 TGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGG 5350763 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 5350764 TTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5350817 Score = 129 bits (142), Expect = 7e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| |||||||| | || |||||| ||||| |||||||| | Sbjct 5356228 TGCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 5356287 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 5356288 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGG 5356347 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||| | || | | |||||||| | || | Sbjct 5356348 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGCTCAA 5356407 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 5356408 CCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5356456 Score = 125 bits (138), Expect = 8e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||||| |||||||| | || |||||| ||||| |||||||| | Sbjct 5350817 TGCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 5350876 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| | ||||||||| | | Sbjct 5350877 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGG 5350936 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| || | || | | ||||| || | || | Sbjct 5350937 GAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTTGGCTCAA 5350996 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| || || || || |||||||| ||||| Sbjct 5350997 CCTCCAGGGTGATGGTCTTGCCTGTAAGGGTCTTGACAAAGATCTGCAT 5351045 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| |||||||| | || |||||| ||||| |||||||| || Sbjct 5351047 CCGCCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5351106 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 5351107 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5351166 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| ||||| || | | ||||| || | || || Sbjct 5351167 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTTGGCTCAACC 5351226 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||||| ||||| || || || || |||||||| ||||| Sbjct 5351227 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 5351273 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || || | ||||| || ||||| | || |||||| ||||| |||||||| || Sbjct 5357142 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5357201 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||||||||| || |||| | ||||||||| | || Sbjct 5357202 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5357261 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| || | || | | || ||||| | || || Sbjct 5357262 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTATCGCTGGGCTCAACC 5357321 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | |||||||| ||||| || || ||||| |||||||| ||||| || Sbjct 5357322 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTT 5357371 >seq14 Length=1339370 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||||||||| | ||| | ||| ||||| | || |||||| ||||| |||||||||| Sbjct 521259 TGCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 521318 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| |||| || ||||| ||||| || || |||| | ||||||||| | | Sbjct 521319 AGAGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAG 521378 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| |||||| ||||| || | | ||||| || | || | Sbjct 521379 GGATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCACTGGGCTCAA 521438 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 521439 CCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521487 Score = 129 bits (142), Expect = 7e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| || |||||||| | ||| | ||| ||||| | || |||||| ||||| ||||| Sbjct 521026 TTAGTTTCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTA 521085 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || || ||||| | || || |||||||| ||||| || || | ||||||||||| Sbjct 521086 GTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTC 521145 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539 | || | | ||||| ||| |||||| |||| || | | |||||||| | Sbjct 521146 TGGAGGGATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTCTCGATGGTGTCGCTGGG 521205 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 521206 CTCGACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565211494652160