Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3265 149 2e-30
>seq3265
Length=3892940
Score = 149 bits (164), Expect = 2e-30
Identities = 456/695 (66%), Gaps = 15/695 (2%)
Strand=Plus/Plus
Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976
||||| || ||||| || ||||||| ||| ||||| || |||| ||| |||| || ||
Sbjct 1639901 ATTGGCATCGATCTGGGCACCACCTATTCCTGTGTTGGGGTTTTCCAGCATGGCAAAGTG 1639960
Query 450977 GAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGT----TTTA 451031
|| || || || || ||||| || | || || | ||||| || | || || ||||
Sbjct 1639961 GAGATCATCGCCAACGACCAGGGCAACAGGACC-ACTCC--CA--GCTATGTGGCCTTTA 1640015
Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAA 451090
| || |||| || ||| | || | ||||| || | | | | | | || |||
Sbjct 1640016 CTGACACAGAGAGGCTTATTGGAGATGCTGCCAAGAACCAGGTTGCCATGAACC-CCACC 1640074
Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150
|||||||| | ||| || ||||| | ||||| | | || | |||| | ||| ||
Sbjct 1640075 AACACAGTCTTTGACGCCAAACGACTCATTGGAAGAAAGTTTAATGACCCTGTTGTCCAG 1640134
Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210
|| | ||| | | ||| | || | ||| | || ||||||||| | ||||
Sbjct 1640135 TCCGACATGAAACTGTGGCCTTTCAAGGTGATCAATGATAACGGAAAGCCCAAAGTTCAG 1640194
Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270
|| | ||||||||||| || || | ||| || || ||||| || || ||||| ||
Sbjct 1640195 GTGGAGTATAAAGGTGAGACCAAGGCCTTTTACCCAGAGGAAATCTCGTCCATGGTCCTG 1640254
Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330
||||||||| || | ||| || || | || || | ||||||| ||
Sbjct 1640255 GTTAAAATGAAGGAGATAGCTGAGGCCTACCTGGGACAGAGGGTGTCAAATGCAGTCATC 1640314
Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390
|| || || ||||||||||| || | ||| ||||||| || || ||||||||| |||
Sbjct 1640315 ACAGTGCCAGCTTATTTCAACGACTCTCAAAGGCAAGCCACAAAGGATGCAGGAGTCATT 1640374
Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
|||| | ||||| || | || || ||||| || |||||||| || | || |||||
Sbjct 1640375 TCTGGACTGAATGTCCTGAGGATCATCAATGAGCCCACAGCAGCAGCCATTGCCTATGGC 1640434
Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510
|| ||| || | ||| || ||| ||| | | | |||||| | ||||||||
Sbjct 1640435 CT-GGATAAGGGTA--AAAGAGGAGAGCGCAATGTGCTCATCTTTGATCTCGGTGGAGGC 1640491
Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570
|| |||| || | || | ||||||||||| | || || ||||| || ||
Sbjct 1640492 ACCTTTGATGTGTCCATCCTGACCATTGAAGATGGCATCTTCGAGGTAAAAGCCACTGCA 1640551
Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || || || || || || || || |||| ||
Sbjct 1640552 GGAGACACACACCTTGGTGGAGAGGACTTTGACAA 1640586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975622004699264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |