Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2387 165 1e-35
seq2122 87.8 2e-12
seq963 87.8 2e-12
seq375 87.8 2e-12
seq52 87.8 2e-12
>seq2387
Length=643009
Score = 165 bits (182), Expect = 1e-35
Identities = 888/1396 (64%), Gaps = 36/1396 (3%)
Strand=Plus/Plus
Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763
||||| |||||| | || || |||||||| ||||| || || || || |||||||
Sbjct 86718 GTTCACCCACGCCTCTCCTACACTCTTCAATGCTGGAACCAACAGGCCACAGCTGTCCAG 86777
Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823
|| ||||| | || | ||||| || ||| | |||||||| | ||| || | |
Sbjct 86778 CTGCTTCCTGCTCGCCATGAAGGACGACAGCATCGAAGGCATTTATGACACGCTGAAGCA 86837
Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATG--TCAGA 111881
|| |||| ||||| || | ||| || || ||||| || || | || |||||
Sbjct 86838 GTGCGCCCTCATCTCCAAATCGGCCGGAGGAATCGGCGTGGCGGTCA--GCTGCATCAGA 86895
Query 111882 GCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTT 111941
| | | ||| || || ||||| | || | || | | || |||||
Sbjct 86896 TCGACGGGGAGCTACATTGCCGGAACCAATGGCAATTCCAACGGGCTGGTCCCCATGCTG 86955
Query 111942 CGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATC 111997
| || | ||| ||| || || || || |||| | ||| | | || ||| |
Sbjct 86956 AGAGTTTACAACAACACGGCCCGTTACGTCGACCAGGGTGG-CAACAAGAGACCCGGAGC 87014
Query 111998 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCT 112057
|||| | || || |||||||||||| || | | || ||||| ||| ||
Sbjct 87015 CTTCGCCATGTACCTGGAGCCATGGCACTTTGACGTTTTCGACTTCCTGGAGCTGAAGAA 87074
Query 112058 CAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116
||| ||| | |||||| | | ||| | ||||| |||| ||| || ||||| || |
Sbjct 87075 GAACACAGGGAAGGAGGAG-CAAAGAGCCAGAGATCTTTTCTACGCCCTGTGGATCCCCG 87133
Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAGACA 112173
| | ||||||||||| || |||||| | | ||||| || | ||||| ||
Sbjct 87134 ACTTGTTCATGAAGAGGGT---GGAGAGCAACCAAGACTGGTCCCTGATGTGTCCGAACG 87190
Query 112174 AGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTAC 112232
|| ||||| || ||| ||| | ||| |||||||| || | |||||||| || |||
Sbjct 87191 AGTGCCCCGGGCTGGACGAGTGCTG-GGGAGAGGAGTTCGAGGAGCTCTACACCAAATAC 87249
Query 112233 GAGGAAGAAAGTCGGGCGACTGCGAC-GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT 112291
||| | || | ||| | |||| |||| ||| | ||||| | || ||| |
Sbjct 87250 GAGAAGGAGGGGAGGGTCAA-GCGAGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATTAT 87308
Query 112292 CAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAA 112351
| |||| || || || || ||||||||||| ||||| |||||||||||||| ||| ||
Sbjct 87309 CGAGTCCCAGACAGAAACCGGTACACCATACATGCTGTACAAAGACGCCTGCAACAGGAA 87368
Query 112352 GAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411
||| || || |||| |||| ||||| | ||||||||| ||||||||| | ||
Sbjct 87369 GAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAAATCGTTGA 87428
Query 112412 ATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTA 112471
|| || | | |||||| || || ||||| || || || ||||||||| || |||
Sbjct 87429 ATACACCAGCGAGGATGAGGTAGCGGTCTGTAATCTGGCCTCCATCGCTCTCAACATGTA 87488
Query 112472 TGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGT 112531
||| || || | ||| ||||| | | |||| || | || || ||| |
Sbjct 87489 TGTCACACCTGA---ACGGACTTTTGACTTTAAAAAGCTGGCGTATGTGACCAAAGTAAT 87545
Query 112532 CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCG 112588
| |||||||| |||| | || || | || | || || || ||| ||
Sbjct 87546 CGTCAAAAACCTGAACAAGATCATAGACATTAACTACTATCCGGTGCCTGA---AGCAGA 87602
Query 112589 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATT 112648
|| || || | | | ||| | ||||| || ||||||| || ||| | || |||| ||
Sbjct 87603 GAAGTCCAACAAGCGCCACAGGCCAATAGGAATCGGTGTGCAGGGTTTGGCTGATGCCTT 87662
Query 112649 CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708
||| || || || | ||||| | ||| || || | || | | || ||
Sbjct 87663 CATCCTGATGCGTTACCCCTTTGAAAGTGCCGAGGCTCAGCTGCTGAACACCCAGATCTT 87722
Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768
|||||| || || ||||||| || |||||||| | ||| |||| | | || ||
Sbjct 87723 TGAGACCATCTACTACGCCGCCCTGGAGGCGAGCTGCGAGCTGGCTGCCGAGCTCGGCCC 87782
Query 112769 ATATGAAACCTTTGAGGGTTCTCCAG-CTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827
|| || || | | || || || | | || |||| | || || | || |||||||
Sbjct 87783 CTACGAGACATACCAAGGCTCCCCCGTCAGCA-AAGGCATCCTCCAGTACGACATGTGGG 87841
Query 112828 AAGGTGA-GACCAAGCTTCACTACGACTGGGACGCT-CTCAAGGAACGCATCAAGGAGAA 112885
|| || | ||| | | |||| ||| ||| || ||||| ||| | |
Sbjct 87842 -AGAAGACGCCCACTGACCTGTGGGACT-GGAAGCTCCTGAAGGAGAAGATCGCCAAACA 87899
Query 112886 GGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTT 112945
|| | | ||||| || || |||| || ||||| || ||||||||||| || ||| |
Sbjct 87900 CGGAGTCAGGAACAGCCTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGATCCT 87959
Query 112946 GGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGC 113005
||| || || || | | | || ||||||| | |||||||| | || |||| |
Sbjct 87960 GGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACACCCGCAGGGTCCTCTC 88019
Query 113006 GGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTG 113065
|||||||| ||| || || ||||| | | ||| | | ||||| || || ||
Sbjct 88020 TGGAGAGTTCCAGATCGTGAATCCTCATCTGCTCAAAGACTTGACAGAGAGAGGACTGTG 88079
Query 113066 GTCCAAGGATATGAAG 113081
| |||| ||||||
Sbjct 88080 GAGTGAGGAGATGAAG 88095
>seq2122
Length=1387681
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 102239
|||||| | | || ||||| ||| ||||| |||||||||||||| || ||| ||
Sbjct 1083500 GAGCGAATTGTGGCTTTTGCAGCTGTGGAGGGAATCTTCTTCTCTGGCTCATTCGCTGCC 1083559
Query 102240 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 102299
|| ||||||||||||||| |||| || ||||| || || || ||||| ||||| |||
Sbjct 1083560 ATCTATTGGCTCAAGAAGAGAGGCCTAATGCCCGGGCTTACCTATTCCAATGAGCTGATC 1083619
Query 102300 TCTCGTGACGAGG 102312
| | || ||||
Sbjct 1083620 AGTAGGGATGAGG 1083632
>seq963
Length=229635
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
|| ||||| ||| ||||| ||||||||||||||||| ||| || || | |||||
Sbjct 212581 GCCTTTGCCGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCTGCGATCTTCTGGCTG 212640
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 212641 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 212700
Query 102312 G 102312
|
Sbjct 212701 G 212701
>seq375
Length=30079
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
|| ||||| ||| ||||| ||||||||||||||||| ||| || || | |||||
Sbjct 25795 GCCTTTGCCGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCTGCGATCTTCTGGCTG 25736
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 25735 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 25676
Query 102312 G 102312
|
Sbjct 25675 G 25675
>seq52
Length=1057507
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
|| ||||| ||| ||||| ||||||||||||||||| ||| || || | |||||
Sbjct 14066 GCCTTTGCCGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCTGCGATCTTCTGGCTG 14007
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 14006 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 13947
Query 102312 G 102312
|
Sbjct 13946 G 13946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620712852661760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |