Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2387 269 5e-67
seq963 129 1e-24
seq375 129 1e-24
seq52 129 1e-24
seq2122 96.9 6e-15
>seq2387
Length=643009
Score = 269 bits (298), Expect = 5e-67
Identities = 934/1439 (65%), Gaps = 40/1439 (3%)
Strand=Plus/Minus
Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478
|||||| |||| ||||||||||||||||||| |||| || || ||||||| |
Sbjct 87747 CAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGCACT 87688
Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538
||||| ||||| || ||| | || |||| ||||| || ||||| || ||
Sbjct 87687 TTCAAAGGGGTAACGCATCAGGATGAAGGCATCAGCCAAACCCTGCACACCGATTCCTAT 87628
Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598
|||||||| | | ||||||| | ||||| ||||| ||||| |||| | ||| ||
Sbjct 87627 TGGCCTGTGGCGCTTGTTGGACTTCTCTGCTTCAGGCACCGGATAGTAGTTAATGTCTAT 87568
Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAA 221658
| ||||| ||||| ||| ||||| ||| | | |||||| | | | ||
Sbjct 87567 GATCTTGTTCAGGTTTTTGACGATTACTTTGGTCACATACGCCAGCTTTTTAA-AGTCAA 87509
Query 221659 CACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAG 221718
|| || ||| ||| || || | | | || || || | | ||||||
Sbjct 87508 ----AAGTC--------CGTTCAGGTGTGACATACATG--TTGAGAGCGATGGAGGCCAG 87463
Query 221719 GTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCT 221778
||||| || || ||||| |||| | |||| || | | ||| ||||| |||||||||||
Sbjct 87462 ATTACAGACCGCTACCTCATCCTCGCTGGTGTATTCAACGATTTCTGTGCAGAGGTTGCT 87403
Query 221779 GCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAG 221838
||| |||||||| ||||||| | || || ||| | ||| ||||| ||||| ||
Sbjct 87402 GCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAG 87343
Query 221839 CATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-G 221897
||| | || || || || ||| | | | | ||| || ||| || | ||| |
Sbjct 87342 CATGTATGGTGTACCGGTTTCTGTCTGGGACTCGATAATGGCGTACCACAGCTG-CTGAG 87284
Query 221898 CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAA 221957
| ||||| | |||||| ||||| ||| || || ||| |||||| || |
Sbjct 87283 CCTTCACCACTCGCTTGACCCTCCCCTC---CTTCTCGTATTTGGTGTAGAGCTCCTCGA 87227
Query 221958 ACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT 222017
||| || || | ||||||||| || || ||| | ||||||||||| |||||
Sbjct 87226 ACTCCTCTCCCCAGCACTCGTCCAGCCCGGGGCACTCGTTCGGACACATCAGGGACCAGT 87167
Query 222018 GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGAT 222077
| |||| | ||||||| |||||| | ||| ||||||||||| || | || ||||
Sbjct 87166 CTTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCACAGGGCGTAGAAAAGAT 87107
Query 222078 CTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGT 222137
|||||| | ||||||||| || |||| ||| |||| |||| || || |||| ||
Sbjct 87106 CTCTGGCTCTTTGCTCCTCCTTCCCTGTGTTCTTCTTCAGCTCCAGGAAGTCGAAAACGT 87047
Query 222138 CAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGAT 222197
|| |||||| |||||||| || | ||| | || ||||||| ||||||||||||||| |
Sbjct 87046 CAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCTGGT 86987
Query 222198 CCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGAC 222257
| || | || |||| | | | || | || ||||| |||||||| |
Sbjct 86986 CGACGTAACGGGCCGTGTTGTTGTAAACTCTCAGCATGGGGACCAGCCCGTTGGAATTGC 86927
Query 222258 CGTTGGTGCCCTTAATGTA-CGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATA 222316
| ||||| || |||||| | | ||| | | || | | ||| | | || ||||||
Sbjct 86926 CATTGGTTCCGGCAATGTAGCTCCCCGTC-GATCTGATGCAGCTGACCGCCACGCCGATT 86868
Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376
|| ||||| ||| ||||| | |||||| ||| || ||||| ||||| || ||
Sbjct 86867 CCTCCGGCCGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCATAAATGCCTTCGATG 86808
Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436
||| ||||| | | ||||| || || |||| ||| | || ||| | ||
Sbjct 86807 CTGTCGTCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGTGGCCTGTTGGTTCCAGCA 86748
Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496
|| || || || ||| |||||| || || | | || | ||| | ||| |||||
Sbjct 86747 TTGAAGAGTGTAGGAGAGGCGTGGGTGAACCACTTCTCTGAGAGCAGGTTGTAGGTCTCG 86688
Query 222497 ACGACTCTGGCGATGT-TGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTG 222555
| | | |||| | ||| | ||| || | || |||||| ||||| |||
Sbjct 86687 ATGGCCGCCTCGATATCTGT-TCTGTGGATGCCGACAGCCACTCTCATTAGCATGTGCTG 86629
Query 222556 GGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612
|||| || |||| | ||| | | | |||||| || | |||||||||||
Sbjct 86628 AGGCCGCTCGGCCACTTTA---TTGTTGATCTTCAACAGGTAGGACCTCTCCAGAGTCTT 86572
Query 222613 GAACCCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCG 222671
||| |||||| ||||| ||| ||| |||||| || || | ||| | || || | |
Sbjct 86571 GAAGCCAAAGAAGTTGTAGGAGAAA-TCTCTGTCGAAAATGATGGCTGAGTTGAG-GCGG 86514
Query 222672 AC-TTGTGCTTTACGCTCAACTCGAAAAAGCGCTC---AGACACGAGGGGAGCGTTCTCT 222727
| |||| || | | | || || | ||| || | | ||| | || |
Sbjct 86513 TCTTTGTTCTCGAGGACGATGTC---AAGGGTCTCCTTGGAGATCATGGGGGAGTGGCGT 86457
Query 222728 TTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAACGTGTCGGGA 222787
||| | ||||| |||| || |||||| | | |||| ||||| |||| |
Sbjct 86456 TTGTTCAGAGGGTTGACGTAGTTGTACAGGTCCTCCATGACATCACTGAACACTTTCTTT 86397
Query 222788 GTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTG 222846
|||| |||||||| || || ||||||||||| | || | ||| ||||||| |||||
Sbjct 86396 GTCTCTTTGTGCAGGTTGGAGACGGCGATCCGGGCGGCGAGGATGGCATAGTCTGGGTG 86338
Score = 100 bits (110), Expect = 5e-16
Identities = 132/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124
|||||| || |||| || || |||||| || | |||| || || ||||| |
Sbjct 88092 CATCTCCTCACTCCACAGTCCTCTCTCTGTCAAGTCTTTGAGCAGATGAGGATTCACGAT 88033
Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184
||||| ||||| ||||| ||||| | ||| | ||| ||| | | ||||||
Sbjct 88032 CTGGAACTCTCCAGAGAGGACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCCTCGATGGA 87973
Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244
||||||||||||||||||||| || ||| ||| |||||||| || |||| |||||| ||
Sbjct 87972 CTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGGGCCAGCAGCAGGCT 87913
Query 221245 GTT 221247
|||
Sbjct 87912 GTT 87910
>seq963
Length=229635
Score = 129 bits (142), Expect = 1e-24
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||| |||||||| ||||||||||| ||||| ||| |||||||| ||
Sbjct 212566 GGAGAGCGTGTGGTGGCCTTTGCCGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCT 212625
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|| ||||||||||| ||| ||| || |||||||| ||| ||| ||||||||||||
Sbjct 212626 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 212685
Query 25993 ATCAGCAGGGACGAGG 26008
|||||||| |||||||
Sbjct 212686 ATCAGCAGAGACGAGG 212701
>seq375
Length=30079
Score = 129 bits (142), Expect = 1e-24
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||| |||||||| ||||||||||| ||||| ||| |||||||| ||
Sbjct 25810 GGAGAGCGTGTGGTGGCCTTTGCCGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCT 25751
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|| ||||||||||| ||| ||| || |||||||| ||| ||| ||||||||||||
Sbjct 25750 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 25691
Query 25993 ATCAGCAGGGACGAGG 26008
|||||||| |||||||
Sbjct 25690 ATCAGCAGAGACGAGG 25675
>seq52
Length=1057507
Score = 129 bits (142), Expect = 1e-24
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||| |||||||| ||||||||||| ||||| ||| |||||||| ||
Sbjct 14081 GGAGAGCGTGTGGTGGCCTTTGCCGCTGTGGAGGGAATCTTCTTCTCTGGTTCGTTCGCT 14022
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|| ||||||||||| ||| ||| || |||||||| ||| ||| ||||||||||||
Sbjct 14021 GCGATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 13962
Query 25993 ATCAGCAGGGACGAGG 26008
|||||||| |||||||
Sbjct 13961 ATCAGCAGAGACGAGG 13946
>seq2122
Length=1387681
Score = 96.9 bits (106), Expect = 6e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| | || || ||||| ||||||||||| ||||| ||| || || || ||
Sbjct 1083497 GGGGAGCGAATTGTGGCTTTTGCAGCTGTGGAGGGAATCTTCTTCTCTGGCTCATTCGCT 1083556
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
||||||| ||||||||| ||| || ||||||||||| || |||||| |||||
Sbjct 1083557 GCCATCTATTGGCTCAAGAAGAGAGGCCTAATGCCCGGGCTTACCTATTCCAATGAGCTG 1083616
Query 25993 ATCAGCAGGGACGAGG 26008
||||| ||||| ||||
Sbjct 1083617 ATCAGTAGGGATGAGG 1083632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928800586987520
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