Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq2387 212 7e-50
seq1563 109 7e-19
>seq2387
Length=643009
Score = 212 bits (234), Expect = 7e-50
Identities = 908/1407 (65%), Gaps = 60/1407 (4%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| | ||| | || || ||||||||||| | ||| || || | | |
Sbjct 86626 CCTCAGCACATGCTAATGAGAGTGGCTGTCGGCATCCACAGAACAGATATCGAGGCGGCC 86685
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || | | || | | || ||||| ||||| | || || |||||
Sbjct 86686 ATCGAGACCTACAACCTGCTCTCAGAGAAGTG-GTTCACCCACGCCTCTCCTACACTCTT 86744
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||||||||| || || || ||| ||||||| |||||||| |||||| ||||| ||
Sbjct 86745 CAATGCTGGAACCAACAGGCCACAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGACGA 86804
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| ||| | || || |||| || || | | |||| || | ||||| || | ||| ||
Sbjct 86805 CAGCATCGAAGGCATTTATGACACGCTGAAGCAGTGCGCCCTCATCTCCAAATCGGCCGG 86864
Query 75451 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCA-ATAAATCTCGTATTCGGGGGAC 75507
|| || || || || | || | ||| | | | || ||| || ||
Sbjct 86865 AGGAATCGGCGTGGCGGTC--AGCTGCATCAGATCGACGGGGAGCT-ACATTGCCGGAAC 86921
Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567
||||| | || | || | | || ||||| | || | ||| ||| || || ||
Sbjct 86922 CAATGGCAATTCCAACGGGCTGGTCCCCATGCTGAGAGTTTACAACAACACGGCCCGTTA 86981
Query 75568 TGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623
|| | | || | ||| | || || || |||| | ||| |||| |||||||
Sbjct 86982 CGTCGA-CCAGGGTGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCTGGAGCCATGGC 87040
Query 75624 A---TGCCGATATCATGGAGTTCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCT 75679
| || || | || || ||||| ||| | | || ||| ||| | || |||
Sbjct 87041 ACTTTGACGTTTTC---GACTTCCTGGAGCTGAAGA-AGAACACAGGGAAGGAGGAGCAA 87096
Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739
| |||||||| || | |||||||||| || ||| | ||||||||| |||| |
Sbjct 87097 AGAGCCAGAGATCTTTTCTACGCCCTGTGGATCCCCGACTTGTTCATGAAGAGGGT---G 87153
Query 75740 GAGGGTGGTCAA---TGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA-CGC 75795
||| | ||| ||||| || | ||||| || || || || || ||| ||
Sbjct 87154 GAGAGCAACCAAGACTGGTCCCTGATGTGTCCGAACGAGTGCCCCGGGCTGGACGAGTGC 87213
Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC 75855
| ||| |||||||| || | |||||||| || || || ||||||| || | ||| ||
Sbjct 87214 TG-GGGAGAGGAGTTCGAGGAGCTCTACACCAAATACGAGAAGGAGGGGAGGGTCAA-GC 87271
Query 75856 GACTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914
|| || || | | | | | ||| | || ||| || | || ||||| || || || |
Sbjct 87272 GAGTGGTGAAGGCTCAGCAGCTGTGGTACGCCATTATCGAGTCCCAGACAGAAACCGGTA 87331
Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974
||||||| ||||| ||||| || || || |||| |||||| ||||| |||| |||| |
Sbjct 87332 CACCATACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCA 87391
Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034
| ||||| || || || ||||| ||||| | || ||||| |||||||| |
Sbjct 87392 CCATCAAATGCAGCAACCTCTGCACAGAAATCGTTGAATACACCAGCGAGGATGAGGTAG 87451
Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCA 76091
| || || ||| |||| || ||||| || | |||||||| |||| || |
Sbjct 87452 CGGTCTGTAATCTGGCCTCCATCGCTCTCAACATGTATGTCACACCTGAA------CGGA 87505
Query 76092 CTTTTGATTATGAAAAACT---TCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148
||||||| | | |||| || ||| | || | || || |||||| || |||
Sbjct 87506 CTTTTGACTTTAAAAAGCTGGCGTATGTGACCAAAGTAATCGT---CAAAAACCTGAACA 87562
Query 76149 GAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGAC 76205
|||| |||| || | ||||| || ||| | | | ||||| || | ||| |
Sbjct 87563 AGATCATAGACATTAACTACTATCCGGTGCCTGAAGCAGAG---AAGTCCAACAAGCGCC 87619
Query 76206 ACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACG 76265
|||| || || || | ||||| || ||| | || |||| || || || || |||
Sbjct 87620 ACAGGCCAATAGGAATCGGTGTGCAGGGTTTGGCTGATGCCTTCATCCTGATGCGTTACC 87679
Query 76266 CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325
| ||||| | || || || | |||| | | |||||||| ||||| || |||
Sbjct 87680 CCTTTGAAAGTGCCGAGGCTCAGCTGCTGAACACCCAGATCTTTGAGACCATCTACTACG 87739
Query 76326 CATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGG 76385
| ||||||||||||| || || |||||| | | || |||| ||||||| | |
Sbjct 87740 CCGCCCTGGAGGCGAGCTGCGAGCTGGCTGCCGAGCTCGGCCCCTACGAGACATACCAAG 87799
Query 76386 GTTCTCCCGCGTC--CCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT 76443
| ||||| |||| | |||| | || |||| || ||||||| || || || | ||
Sbjct 87800 G--CTCCCCCGTCAGCAAAGGCATCCTCCAGTACGACATGTGGG-AGAAGACGCCCA-CT 87855
Query 76444 CAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501
| | | |||||| | | || ||||| ||| | | || | | |||||
Sbjct 87856 GACCTGTGGGACTGGAAGCTCCTGAAGGAGAAGATCGCCAAACACGGAGTCAGGAACAGC 87915
Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561
|| || |||| || ||||| || ||||||||||| || ||| |||| || || || | |
Sbjct 87916 CTGCTGCTGGCCCCGATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCC 87975
Query 76562 TTTGAACCATACACAACAAACATCTAC 76588
| || | ||||| | |||||||||
Sbjct 87976 ATCGAGGCCTACACCAGCAACATCTAC 88002
>seq1563
Length=18910200
Score = 109 bits (120), Expect = 7e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955
|||||||| || ||||| |||||||| ||||| |||||||| || ||||||| ||||||
Sbjct 8605922 TCACAGACAGAAACTGGCACACCATACATGCTCTACAAGGACGCCTGTAACAGGAAGAGC 8605863
Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015
||||| ||||| |||| || ||||| | ||||| ||||| || || ||||||||
Sbjct 8605862 AACCAGCAGAATCTGGGCACCATCAAATCCAGCAATCTGTGCACAGAGATAGTAGAGTAC 8605803
Query 76016 ACA 76018
|||
Sbjct 8605802 ACA 8605800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596541203287040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |