Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 2e-15 >seq14 Length=1339370 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||||| || || || ||||| | || | ||| || || || ||||| Sbjct 521486 ATGCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 521545 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | || || | ||||| || ||||| || | ||||| || || ||| Sbjct 521546 GACAAGGTACGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGA 521605 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||||||||| || || |||| || | |||| ||| || ||| | ||| Sbjct 521606 GGGATTCCTTCTTTATCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCG 521665 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || || | ||| || || ||||| || || || || ||||| || ||||| ||| Sbjct 521666 ACCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATCTTA 521719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899611576450560