Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2494 143 2e-29
seq659 143 2e-29
>seq2494
Length=52301
Score = 143 bits (158), Expect = 2e-29
Identities = 135/172 (78%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || ||||||||||| || ||||||| |||||| || | |||||| ||||||
Sbjct 18420 AGATCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 18479
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| |||||| ||||| | |||||||| |||||||||||| | || |||||||||
Sbjct 18480 AGCATGTCCTGCAACTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGGTCGTTTTTG 18539
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486
||| | ||| || || ||||| || || || || || |||| |||||||
Sbjct 18540 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCAAAAAACTTGGTCGGGT 18591
>seq659
Length=23678
Score = 143 bits (158), Expect = 2e-29
Identities = 135/172 (78%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
|| ||||| || ||||||||||| || ||||||| |||||| || | |||||| ||||||
Sbjct 1588 AGATCAGTTTCAGGGTTGTCACACTCGGGACACAGCACAAATTTTCTGATGAACCCATCA 1529
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|||| |||||| ||||| | |||||||| |||||||||||| | || |||||||||
Sbjct 1528 AGCATGTCCTGCAACTTGTTCGCCTCGTGGGATCCGTTGACGATGTAACGGTCGTTTTTG 1469
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGT 34486
||| | ||| || || ||||| || || || || || |||| |||||||
Sbjct 1468 GTATCAAACTGGGTCTGAGCGCCGAGTTCACAACCAAAAAACTTGGTCGGGT 1417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412822440021344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |