Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_024303.1
Length=144898
Score E
Sequences producing significant alignments: (Bits) Value
seq1892 100 3e-16
>seq1892
Length=891319
Score = 100 bits (110), Expect = 3e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184
|| || ||||| || | || |||||| | ||| |||||||| ||| |||| | |||||
Sbjct 832610 AGTATCTGGGGCCCAACTTGTGATGGCCTTGATCGCATTGTTGAGCAGTGTAACCTGCCT 832669
Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244
|| || || || || || ||||| | || ||||||||||| || |||| ||| |
Sbjct 832670 GACCTGCAGGTCGGTGATTGGCTGGTCTTCGAAAACATGGGTGCCTACACTGTGGCTGCC 832729
Query 21245 TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294
|| || ||||| |||||||||| || || || | |||||||| || ||
Sbjct 832730 TCGTCCACCTTCAACGGCTTCCAAAGACCTGACATTCACTATGTCATGTC 832779
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/151 (74%), Gaps = 4/151 (3%)
Strand=Plus/Plus
Query 20589 TGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGCCAACGCCTGCTAAAACAGGCCAAAA 20648
||||||| ||||||||||| || | |||| | | | | || || | | ||| |||
Sbjct 831530 TGAGTGTGAAGTTTGGGGCCCCACTGAAAGCTTGTCGAGGTCTTCTGGAGCGGGCTAAAG 831589
Query 20649 AATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCACGTGGGCAGTGGCTGCAAAGATGC-- 20706
|| | || || || |||||||| ||||||||||| || ||||||||||||| |||||
Sbjct 831590 AACTGGGGCTGGATGTGATCGGCGTCAGCTTCCATGTTGGCAGTGGCTGCACTGATGCCA 831649
Query 20707 ACAGGCTTACAGAAAAGCCATAGCTGAGGCC 20737
|||| |||| | | || || ||||| |||
Sbjct 831650 ACAG--CTACACACAGGCTATCGCTGATGCC 831678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 463523535229440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |