Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1892 100 3e-16 >seq1892 Length=891319 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 || || ||||| || | || |||||| | ||| |||||||| ||| |||| | ||||| Sbjct 832610 AGTATCTGGGGCCCAACTTGTGATGGCCTTGATCGCATTGTTGAGCAGTGTAACCTGCCT 832669 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || || || || || ||||| | || ||||||||||| || |||| ||| | Sbjct 832670 GACCTGCAGGTCGGTGATTGGCTGGTCTTCGAAAACATGGGTGCCTACACTGTGGCTGCC 832729 Query 21245 TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 || || ||||| |||||||||| || || || | |||||||| || || Sbjct 832730 TCGTCCACCTTCAACGGCTTCCAAAGACCTGACATTCACTATGTCATGTC 832779 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 20589 TGAGTGTCAAGTTTGGGGCTCCTATTGAAGCCAGCCAACGCCTGCTAAAACAGGCCAAAA 20648 ||||||| ||||||||||| || | |||| | | | | || || | | ||| ||| Sbjct 831530 TGAGTGTGAAGTTTGGGGCCCCACTGAAAGCTTGTCGAGGTCTTCTGGAGCGGGCTAAAG 831589 Query 20649 AATTAGGCCTAGAAGTGATCGGAGTCAGCTTCCACGTGGGCAGTGGCTGCAAAGATGC-- 20706 || | || || || |||||||| ||||||||||| || ||||||||||||| ||||| Sbjct 831590 AACTGGGGCTGGATGTGATCGGCGTCAGCTTCCATGTTGGCAGTGGCTGCACTGATGCCA 831649 Query 20707 ACAGGCTTACAGAAAAGCCATAGCTGAGGCC 20737 |||| |||| | | || || ||||| ||| Sbjct 831650 ACAG--CTACACACAGGCTATCGCTGATGCC 831678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463523535229440