Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq14 167 5e-36
seq1563 149 1e-30
seq1988 98.7 2e-15
seq10 91.5 3e-13
seq3289 84.2 4e-11
seq2619 84.2 4e-11
>seq14
Length=1339370
Score = 167 bits (184), Expect = 5e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||| ||| || || | || || || || || ||||| || || || |||||
Sbjct 521489 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 521548
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | |||||||| || ||||| ||||||||||| || || || || || |||||
Sbjct 521549 AAGGTACGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGAGGG 521608
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|||||||| ||||| || ||||| || || ||||||||||| || || | || || ||
Sbjct 521609 ATTCCTTCTTTATCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCGACC 521668
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || ||||| || |||| ||||| ||||| ||||||||
Sbjct 521669 TCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 521715
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||| ||| || || | || || || || || ||||| || || || || ||
Sbjct 521261 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 521320
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | |||||||| || ||||| ||||||||||| || || || || ||||||||
Sbjct 521321 AGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGG 521380
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||||||||| || || ||||| || || || || || || || ||| | || || ||
Sbjct 521381 ATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTCTCGATGGTGTCACTGGGCTCAACC 521440
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 521441 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521487
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|||||||||| ||| || || | || || || || || ||||| || || || |||||
Sbjct 521033 CCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 521092
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || || |||||||| || | || || ||||||||
Sbjct 521093 AGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCTGGAGGG 521152
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|||||||||||||| || ||||| ||||| || || || || || || | || || ||
Sbjct 521153 ATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCGACC 521212
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| |||| ||||| || || ||||||||
Sbjct 521213 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 521259
>seq1563
Length=18910200
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| |||||| || | || || || || || ||||| || || || |||||
Sbjct 5350819 CCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5350878
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 5350879 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5350938
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| ||||| || || ||||| || ||| | || || ||
Sbjct 5350939 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCACTTGGCTCAACC 5350998
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || ||||||||||| | ||||| ||||| ||||||||
Sbjct 5350999 TCCAGGGTGATGGTCTTGCCTGTAAGGGTCTTGACAAAGATCTGCAT 5351045
Score = 143 bits (158), Expect = 5e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| |||||| || | || || || || || ||||| || || || ||||
Sbjct 5351045 TACCGCCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 5351104
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || ||||||||||| || || || || ||||| |
Sbjct 5351105 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGG 5351164
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || |||||||| || ||||| || || || ||| | || || |
Sbjct 5351165 GAATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTTGGCTCAA 5351224
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| || | ||||| ||||| ||||||||
Sbjct 5351225 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 5351273
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| |||||| || | || || || || || ||||| ||||| || |||||
Sbjct 5356914 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGAG 5356973
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 5356974 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5357033
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || ||||| ||||| || || | || || ||
Sbjct 5357034 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACC 5357093
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||||||||| | ||||| ||||| ||||||||
Sbjct 5357094 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 5357140
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || |||| |||||| || | || || || || || ||||| || || || |||||
Sbjct 5350590 ACCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 5350649
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | || ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 5350650 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 5350709
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| || || ||||| || || || || ||||| || ||| | ||||| ||
Sbjct 5350710 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCAAC 5350769
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| || | ||||| || || ||||||||
Sbjct 5350770 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5350817
Score = 138 bits (152), Expect = 2e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || |||| |||||| || | || || || || || ||||| || || || ||||
Sbjct 5356684 TACCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 5356743
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| || || || || |||||||| | || || || ||||| |
Sbjct 5356744 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGG 5356803
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || ||||| || || ||||| ||||| ||||| | || || |
Sbjct 5356804 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCGCTTGGCTCGA 5356863
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || ||||||||||| | || || ||||| ||||||||
Sbjct 5356864 CCTCCAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCAT 5356912
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| |||||| || | || || || || || ||||| || || || |||||
Sbjct 5355774 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5355833
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 5355834 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5355893
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || ||||| ||||| || || | || || ||
Sbjct 5355894 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACC 5355953
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| || | || || ||||| ||||||||
Sbjct 5355954 TCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 5356000
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| |||||| || | || || || || || ||||| || || || |||||
Sbjct 5356458 CCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5356517
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 5356518 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5356577
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || ||||| ||||| || || | || || ||
Sbjct 5356578 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCGACC 5356637
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| || | ||||| || || ||||||||
Sbjct 5356638 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5356684
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || |||| |||||| || | || || || || || ||||| || || || |||||
Sbjct 5356230 CCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5356289
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || ||||| || || || ||||||||||| || || || || ||||| ||
Sbjct 5356290 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5356349
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| |||||||| || || ||||| || || || || ||||| || || | || || ||
Sbjct 5356350 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTTGGCTCAACC 5356409
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||| || || |||||||| || | ||||| || || ||||||||
Sbjct 5356410 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 5356456
>seq1988
Length=2502155
Score = 98.7 bits (108), Expect = 2e-15
Identities = 116/157 (74%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214
||||||||||| || || ||||| | |||||||| ||||| ||||||||||| || |||
Sbjct 1095688 TGGTGGTACTACATCTCCAAAGGAGTGGAATACTTGGATACAGTGTTTTTCATCCTGAGG 1095747
Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274
|| ||||| || ||||| || || | ||||| || ||||| | || ||||| | |
Sbjct 1095748 AAGAAGTTCAACCAGGTCAGCTTCCTCCACGTCTACCATCACTGCACCATGTTCATCCTG 1095807
Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311
| ||| | || || || ||| | |||| || ||||
Sbjct 1095808 TGGTGGATTGGTATCAAGTGGGTCCCCGGCGGACAAG 1095844
>seq10
Length=14175190
Score = 91.5 bits (100), Expect = 3e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 60147 GAGCATTATGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCA 60206
|||| | |||||||| | || |||||||| || || ||| | || || ||||||||||
Sbjct 5533673 GAGCTCTGTGGTGGTATTTCATCTCTAAAGGCATCGAGTACCTGGACACAGTGTTTTTCA 5533614
Query 60207 TACTTAGGAAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGT 60266
| || ||||| || ||||| ||||||| || | || || || || || | || ||||
Sbjct 5533613 TTCTGAGGAAGAAATTTAACCAGGTTACCTTCCTGCATGTCTACCACCACTGCACCATGT 5533554
Query 60267 TTACTTTAGGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA 60309
| || | | ||| | ||||| |||||| | || ||||| ||
Sbjct 5533553 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACA 5533511
>seq3289
Length=18717
Score = 84.2 bits (92), Expect = 4e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|||||||||||||| ||||| || || |||||||| || || || | || || || ||
Sbjct 9272 CCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCGATAGTGTCGCTGGGCTCAACCTCG 9331
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || ||||| || ||||||||||| || || ||||||||
Sbjct 9332 AGGGTGATGGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 9375
>seq2619
Length=386543
Score = 84.2 bits (92), Expect = 4e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766
|||||||||||||| ||||| || || |||||||| || || || | || || || ||
Sbjct 17659 CCTTCCTTATCTTGGATCTTAGCCTTGACATTTTCGATAGTGTCGCTGGGCTCAACCTCG 17600
Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || ||||| || ||||||||||| || || ||||||||
Sbjct 17599 AGGGTGATGGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 17556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981779296650912
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