Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq1988 105 1e-17
seq10 102 1e-16
>seq1988
Length=2502155
Score = 105 bits (116), Expect = 1e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444
||||||||||| || || ||||| | |||||||| ||||||||||||||||| || |||
Sbjct 1095688 TGGTGGTACTACATCTCCAAAGGAGTGGAATACTTGGATACAGTGTTTTTCATCCTGAGG 1095747
Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504
|| ||||| || || || ||||| || ||||| || ||||| | || ||||| | |
Sbjct 1095748 AAGAAGTTCAACCAGGTCAGCTTCCTCCACGTCTACCATCACTGCACCATGTTCATCCTG 1095807
Query 58505 GGATGGGTAGGTATTAAATGG 58525
| ||| | ||||| || |||
Sbjct 1095808 TGGTGGATTGGTATCAAGTGG 1095828
>seq10
Length=14175190
Score = 102 bits (112), Expect = 1e-16
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436
|||| | |||||||| | || |||||||| || || ||| | || |||||||||||||
Sbjct 5533673 GAGCTCTGTGGTGGTATTTCATCTCTAAAGGCATCGAGTACCTGGACACAGTGTTTTTCA 5533614
Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496
| || ||||| || ||||| || |||| ||| || || || || || || | || ||||
Sbjct 5533613 TTCTGAGGAAGAAATTTAACCAGGTTACCTTCCTGCATGTCTACCACCACTGCACCATGT 5533554
Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540
| || | | ||| | || || |||||| | |||||||| |||
Sbjct 5533553 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 5533510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903368197626880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |