Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09] 3,808 sequences; 668,481,366 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq10 125 9e-24 >seq10 Length=14175190 Score = 125 bits (138), Expect = 9e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32668 GAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCA 32727 |||| |||||| ||||| ||||||||||| || || || || || || | || |||| Sbjct 5533673 GAGCTCTGTGGTGGTATTTCATCTCTAAAGGCATCGAGTACCTGGACACAGTGTTTTTCA 5533614 Query 32728 TAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGT 32787 | |||| |||||||||||||| |||| ||| |||| || |||||||| | ||||||| Sbjct 5533613 TTCTGAGGAAGAAATTTAACCAGGTTACCTTCCTGCATGTCTACCACCACTGCACCATGT 5533554 Query 32788 TTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | || | | ||||| || || |||||| | |||||||||||| Sbjct 5533553 TCACGCTCTGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 5533510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603152088593920