Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1756 156 3e-33
seq3402 100 2e-16
>seq1756
Length=808860
Score = 156 bits (172), Expect = 3e-33
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || |||| ||| || |||||||| || || || | |||||||||||| || || ||
Sbjct 97650 AGGCCTGTGATGTGGGCGATCATGTAGGTAAGAAGTGCGTAGCTGGCGATATTGAAAGGC 97591
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| || || |||||||| ||||||| |||||| ||||||||||| ||||| || || | |
Sbjct 97590 ACTCCCAGACCCATGTCGCCCGACCGCTGGTACAGCTGACACGACAGCTCACCATCACAC 97531
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30115
||||| ||||| || | ||||||||| || || |||||||||||| || ||||
Sbjct 97530 ACGTAGAACTGGCAGAGGGCGTGGCAGGGGGGCAGAGCCATGAGGGGCAGGTCT 97477
Score = 154 bits (170), Expect = 1e-32
Identities = 140/175 (80%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||||| ||||||||||| ||||| |||||||||||||| |||||||| |||||||||||
Sbjct 97169 CATGTTTGTGTACTCTGCCCCGAAGTGCCTCCACTGGAAACCGTACACAGGTCCCAGGTC 97110
Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342
||||| || |||| | ||| || ||||||| || || | ||| |||||||| ||
Sbjct 97109 GCCCTCCTCTCTGTCCGTGAACCCAAGGTTGTCCAGGAAATCCCGGGACCCGTTGGCATC 97050
Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30396
||| ||||| ||||| ||| | |||||||| |||| ||||| || |||| ||||
Sbjct 97049 CCAAATCTTCACCCCTTTCGCTGAGAGCTCCTTGGCATTTGTTGATCCCTGTGAC 96995
>seq3402
Length=17327306
Score = 100 bits (110), Expect = 2e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 110159 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAGTGTCGCACGCAA 110218
|| ||||||||||||||||| | ||| |||| | || ||||| |||||||| ||| |||
Sbjct 1304102 ACCCTGGCAGTAGACGATATTTGTCTGGACTGATTTCAGGGAGGAAAGTGTCACACTCAA 1304161
Query 110219 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTATCCCCGGGCTCTCCATGAGCTCCC 110278
| ||| || | | ||||||||||| ||| | |||||||||||||||| | ||||
Sbjct 1304162 ACTGCTTCAGGATTCGCGTGACAAACAGTCTCCTGCTCCCCGGGCTCTCCATCAACTCCT 1304221
Query 110279 CGTAG 110283
||||
Sbjct 1304222 GGTAG 1304226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406291543134336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |