Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lates_20calcarifer_20[refseq_20GCF_5F001640805.1_202016-05-09]
3,808 sequences; 668,481,366 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq14 170 1e-37
seq1563 149 5e-31
seq1856 84.2 2e-11
>seq14
Length=1339370
Score = 170 bits (188), Expect = 1e-37
Identities = 178/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| |||||||| | | ||| || || || ||| |||||| ||||||||||| || |
Sbjct 521031 TTCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 521090
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
||| ||| | || ||||||||||||||||||||||| | ||||||||| |||| ||
Sbjct 521091 AGAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCTGGAG 521150
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287
| | |||||||| ||| ||||| |||| | |||| | ||||||||| || ||
Sbjct 521151 GGATTCCTTCCTTATCCTGGATCTT-GGCTTTGACGTTCTCGATGGTGTCGCTGGGCTCG 521209
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || || ||||||||||||||||| ||||||
Sbjct 521210 ACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 521260
Score = 152 bits (168), Expect = 4e-32
Identities = 175/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | | ||| || || || ||| |||||| ||||||||||| ||
Sbjct 521257 CATGCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 521316
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| |||| |||||||| || || |||||||||| | |||||| ||||
Sbjct 521317 GGAGAGGGTGCGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGG 521376
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| || | | |||| | |||||||| || |
Sbjct 521377 AGGGATTCCTTCCTTGTCCTGGATCTT-AGCCTTGACGTTCTCGATGGTGTCACTGGGCT 521435
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||||||||| ||||||
Sbjct 521436 CAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 521488
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | | ||| || || || ||| |||||| ||||||||||| ||
Sbjct 521485 CATGCCTCCTCTCAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 521544
Query 44167 -GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | || | || |||| |||||||| || || |||||||||| | |||||| || |
Sbjct 521545 AGACAAGGT-ACGGCCGTCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCCG 521603
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
||| | ||||| || ||| ||||| ||| | || | ||||||||| || |
Sbjct 521604 GAGGGATTCCTTCTTTATCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCT 521663
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || ||||| || || ||||||||||| ||||| |||||
Sbjct 521664 CGACCTCCAAAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 521715
>seq1563
Length=18910200
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || ||||| || || ||| |||||| ||||||||||| || | |
Sbjct 5350591 CCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5350650
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || |||||||||| | |||||| |||| ||
Sbjct 5350651 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5350710
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| |||||||| ||| ||||| |||| | |||| | |||||||| || ||| ||
Sbjct 5350711 ATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCACTGGGTTCAAC 5350769
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| || || ||||| || ||||||||||| |||||||| ||||||
Sbjct 5350770 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 5350818
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||||| || || ||| |||||| ||||||||||| ||
Sbjct 5356226 CATGCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5356285
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||||| | |||||| ||||
Sbjct 5356286 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGG 5356345
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| |||| | |||| | ||||||||| | |
Sbjct 5356346 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTTGGCT 5356404
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || ||||||||||| |||||||| ||||||
Sbjct 5356405 CAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 5356457
Score = 140 bits (154), Expect = 2e-28
Identities = 183/250 (73%), Gaps = 5/250 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || || || || || ||| |||||| ||||||||||| ||
Sbjct 5357138 CATACCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5357197
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| ||||||||||||| | |||||| ||||
Sbjct 5357198 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGG 5357257
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| |||| | |||| | ||||| ||| || |
Sbjct 5357258 GGGAATGCCTTCCTTGTCCTGGATCTT-GGCTTTCACGTTCTCAATGGTATCGCTGGGCT 5357316
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGA- 44344
| ||||| | || || ||||| || |||||||| ||||| ||||| |||||| | | |
Sbjct 5357317 CAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACAAAGATCTGCATGTTTTTAA 5357376
Query 44345 --ATGAAAAT 44352
||||||||
Sbjct 5357377 CTATGAAAAT 5357386
Score = 138 bits (152), Expect = 8e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||||| || || ||| |||||| ||||||||||| ||
Sbjct 5356454 CATGCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5356513
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||||| | |||||| ||||
Sbjct 5356514 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGG 5356573
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | ||||||||| | ||
Sbjct 5356574 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTC 5356633
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || ||||| || ||||||||||| |||||||| |||||
Sbjct 5356634 GACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 5356684
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || || || || || ||| |||||| ||||||||||| ||
Sbjct 5355998 CATACCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5356057
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| ||||||||||||| | |||||| ||||
Sbjct 5356058 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGG 5356117
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | |||||||| || |||
Sbjct 5356118 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGTTC 5356177
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || || |||||||| || ||||| ||||||
Sbjct 5356178 AACCTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCATG 5356229
Score = 134 bits (148), Expect = 1e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || || || || || ||| |||||| ||||||||||| ||
Sbjct 5356682 CATACCGCCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5356741
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| |||||||||||||| | |||||| ||||
Sbjct 5356742 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGG 5356801
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | ||||| ||| | ||
Sbjct 5356802 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTATCGCTTGGCTC 5356861
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| || || ||||| || |||||||| ||||| ||||| ||||||
Sbjct 5356862 GACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACAAAGATCTGCATG 5356913
Score = 132 bits (146), Expect = 3e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||||| || || ||| |||||| ||||||||||| ||
Sbjct 5350815 CATGCCACCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5350874
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||||| | |||||| ||||
Sbjct 5350875 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGG 5350934
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| |||| | |||| | |||||||| | |
Sbjct 5350935 GGGAATGCCTTCCTTGTCCTGGATCTT-GGCTTTCACGTTCTCAATGGTGTCACTTGGCT 5350993
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || ||||| || || |||||||| || ||||| |||||
Sbjct 5350994 CAACCTCCAGGGTGATGGTCTTGCCTGTAAGGGTCTTGACAAAGATCTGCAT 5351045
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||||| || || ||| |||||| ||||||||||| ||
Sbjct 5351043 CATACCGCCCCTCAGACGCAGGACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 5351102
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||||| | |||||| ||||
Sbjct 5351103 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGG 5351162
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | | ||| | |||||||| | |
Sbjct 5351163 GGGAATGCCTTCCTTGTCCTGGATCTT-TGCCTTGACATTCTCGATGGTGTCACTTGGCT 5351221
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||| | || || ||||| || ||||||||||| || ||||| ||||||
Sbjct 5351222 CAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 5351274
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || || || || || ||| |||||| ||||||||||| || | |
Sbjct 5355774 CCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 5355833
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || |||||||||| | |||||| |||| ||
Sbjct 5355834 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 5355893
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| ||| | | | ||||||||| | || |||
Sbjct 5355894 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTCAACC 5355953
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || || ||||| || |||||||| || || ||||| |||||
Sbjct 5355954 TCCAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 5356000
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || || || || || ||| |||||| ||||| ||||| ||
Sbjct 5356910 CATGCCACCCCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTGTAGTC 5356969
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||||| | |||||| ||||
Sbjct 5356970 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGG 5357029
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | | | ||||||||| | ||
Sbjct 5357030 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTTGGCTC 5357089
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || ||||||||||| || ||||| |||||
Sbjct 5357090 AACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 5357140
>seq1856
Length=323953
Score = 84.2 bits (92), Expect = 2e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 44143 GCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGC 44202
|||| |||| ||||||||||| |||| ||| ||| | || ||||||||||| || ||
Sbjct 127371 GCTCACCTTCTGGATGTTGTAGTCGGACAGTGTGCGTCCATCCTCCAGCTGCTTTCCAGC 127430
Query 44203 AAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236
||||||||| | ||||||||| | ||| | ||||
Sbjct 127431 AAAGATCAACCTCTGCTGATCAGGAGGGATACCT 127464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359973692845536
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