Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq9 102 7e-17 >seq9 Length=53241385 Score = 102 bits (112), Expect = 7e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || ||||| |||||| | | || ||||||||||| | || |||||||| ||| Sbjct 31663874 ATGGCTCTTCCTCCCTGTCACGCCCTGTGCCAGTTTTACGTGTCCAATGGTGAATTGTCC 31663933 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | || ||| | || || || ||||| || || || || ||||||||||| | Sbjct 31663934 TGCCAGCTCTATCAGCGCTCAGGAGACATGGGGCTGGGTGTGCCATTCAACATTGCCAGC 31663993 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 ||||| || || || ||||| | || ||||| || || || || Sbjct 31663994 TATGCGCTGCTCACATACATGATCGCTCATGTCACTGGGCTGAA 31664037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399494622392670