Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq5 114 2e-20 >seq5 Length=51417047 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| | |||||||||||||| || | ||| || || ||||||||| | || || || Sbjct 26689804 CCTGATATCCGAACTGGTTACAGGGCACCCCCAGTACCACCAGCCCCTGGGCGCCGTAGC 26689863 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || |||| |||| ||||||||| ||||| |||| | || | |||||||| ||||| | Sbjct 26689864 GCTGCTGGAGCTGGTTCATCTGGGTGTAATCCCTGGTGGTCGTGCCTCAGAGAGACGCCA 26689923 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCC 83536 |||||||||| |||| |||| |||| Sbjct 26689924 CGTTCTCGATCAGCACGACCTTGCCC 26689949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608782143217040