Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq9 118 8e-22 >seq9 Length=53241385 Score = 118 bits (130), Expect = 8e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| ||||| |||||| | ||||| ||||| || ||||| |||||||| | || Sbjct 31663861 AGATATGCCTAATATGGCTCTTCCTCCCTGTCACGCCCTGTGCCAGTTTTACGTGTCCAA 31663920 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||||||||| || || | ||||| || || | || ||||| |||||||| || || Sbjct 31663921 TGGTGAATTGTCCTGCCAGCTCTATCAGCGCTCAGGAGACATGGGGCTGGGTGTGCCATT 31663980 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 ||| ||||| || ||||||||||| || || ||||| || ||||| || Sbjct 31663981 CAACATTGCCAGCTATGCGCTGCTCACATACATGATCGCTCATGTCAC 31664028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174629904070