Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 6e-12 >seq3 Length=56798892 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| |||||||| | || || | ||||| || ||||| || || || |||||| Sbjct 12781198 ACCTGAAACTCTCCAGAGAGCACCCTGCGCGTATAGATGTTGCTGGTGTAAGGCTCAATG 12781257 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGG 37244 |||||||| || | | ||| |||| ||| || ||||||||||| || Sbjct 12781258 GACTCATTGTTGCCCAGTATCTGAGCTGTGGAGGCAGTAGGCATAGG 12781304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468513520265440