Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=56798892 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | || | ||| | ||||| |||||| || |||||||| ||||| || ||||| | Sbjct 12782469 TGTACTCCACCACCTCTGTGCACAGATTGCTGCACTTGATGGTACCCAGGTTCTGCTGGT 12782528 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 | || |||||||||||||| || ||||| | |||||| || || |||||| ||| | Sbjct 12782529 TGCTCTTCCTGTTGCACGCATCTTTGTAAACCATGTAGGGGGTTCCGGTCTCCGTCTGAG 12782588 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 12782589 ACTCGATGAT 12782598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472001436291840