Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 3e-14 >seq3 Length=56798892 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118188 CCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTGTGATGTATC 118247 || ||||| ||| ||| || ||||| || |||| || ||||||| ||| || ||| Sbjct 47264159 CCAGCCCTGCCTGACTCCTGGTAATACCCTTCCACAGACTTGGGCAGGCTGGCGTGAATC 47264218 Query 118248 ACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAACATATCAC 118306 || ||||||||||| ||||||||||||||||| ||||| || || || | ||| || || Sbjct 47264219 ACAAACCGCACGTCTGGTTTATCGATGCCCATTCCGAAAGCAATGGTAGCACACATTAC 47264277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381763838599344