Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=69065196 Score = 96.9 bits (106), Expect = 3e-15 Identities = 96/122 (79%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 |||||||| ||||| ||||||||||| || |||||||| || ||||| ||||| |||| Sbjct 49401031 ACCAGATTCTCGTTAACGATGCCGTCACTAGCGGCGAAGAAAGCCAGGACGTGGGAGATG 49400972 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCG-TGTCCTTGGACAGGTCCAC 133397 || | ||||| | ||| |||| | |||||||| || | ||| ||||| |||||||| Sbjct 49400971 AAGTACCGCTCCTCGTCCTTCAGGGACTCCCAGT-GCTTGAGGTCTTTGGAGAGGTCCAC 49400913 Query 133398 CT 133399 || Sbjct 49400912 CT 49400911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160758339840