Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq26 96.9 3e-14 >seq26 Length=13772684 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 282339 CAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGAC 282398 |||| ||||| |||| ||||||||||||||| |||||||| || | | |||||||| | Sbjct 9355593 CAAG-CCATAGGCAATAGCAGCAGCAGTTGGCTCATTAATGATCCGGAGCACATTAAGCC 9355651 Query 282399 CAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAA 282458 ||| ||| | || |||||||| || || || | || || ||||| || || || || | Sbjct 9355652 CAGAAATGGTGCCAGCATCTTTTGTAGCCTGGCGCTGAGAGTCGTTGAAGTACGCTGGCA 9355711 Query 282459 CAGTAATAACGGCAT 282473 |||| | ||| |||| Sbjct 9355712 CAGTGACAACAGCAT 9355726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740535841539276