Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=69065196 Score = 96.9 bits (106), Expect = 3e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||||||||| || | || |||||| | ||| |||||||| ||| || | |||| Sbjct 43405153 AGCATTTGGGGACCAACGTGTGATGGCCTGGATCGCATTGTTGAGCTCTGCGGTATGCCG 43405094 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 || || || || || |||||| | | ||||| |||||||| ||||||| ||| | || Sbjct 43405093 GAACTCCAGGTTGGAGACTGGATGCTGTTTGAGAACATGGGAGCTTACACAGTGG-CTGC 43405035 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 || || |||||||| || |||| || ||||| | ||||| || || ||| Sbjct 43405034 ATCATCCACCTTTAATGGGTTCCAGAAACCAGACATTCACTACGTGATGTCA 43404983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463534440139680