Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 8e-14 >seq1 Length=69065196 Score = 93.3 bits (102), Expect = 8e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || || ||||||||||| | |||||||| | || || ||||| || ||||||||||| Sbjct 57658162 GCCTTGTGGTGGTACTACGTCTCTAAAGGAGTGGAGTATTTAGACACTGTGTTTTTCATC 57658103 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || | || || ||||| || || |||||||| ||||| || || || | || ||||| Sbjct 57658102 CTGCGCAAGAAATTTAACCAGGTCAGCTTTCTGCACGTCTACCACCACTGCACAATGTTC 57658043 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || | | ||| | || || || ||| | || ||||| || Sbjct 57658042 ACCCTCTGGTGGATTGGCATCAAGTGGGTGGCTGGAGGGCA 57658002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903389450375360