Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq9 100 2e-16 >seq9 Length=53241385 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 41076 TGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGAC 41135 || ||||||||||| | |||||||||| |||| || || | ||||| | ||||| ||| Sbjct 31663901 TGCCAGTTTTACGTGTCCAATGGTGAATTGTCCTGCCAGCTCTATCAGCGCTCAGGAGAC 31663960 Query 41136 ATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCA 41195 ||||| || || || || || ||||| || || ||||| |||||||| || ||||| || Sbjct 31663961 ATGGGGCTGGGTGTGCCATTCAACATTGCCAGCTATGCGCTGCTCACATACATGATCGCT 31664020 Query 41196 CACGTTAC 41203 || || || Sbjct 31664021 CATGTCAC 31664028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446670465630