Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 9e-11 >seq3 Length=56798892 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 |||||| ||| | ||||| ||||||| | |||||||||| |||| || || |||||||| Sbjct 12781230 ATAGATGTTGCTGGTGTAAGGCTCAATGGACTCATTGTTGCCCAGTATCTGAGCTGTGGA 12781289 Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 118278 ||| || ||||| || | || || | |||||||||| Sbjct 12781290 GGCAGTAGGCATAGGGGACAGCAGTAAACTGTTACGGA 12781327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420311172560