Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1 105 8e-18 >seq1 Length=69065196 Score = 105 bits (116), Expect = 8e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729 |||||||||| || | |||||||||| | || ||| |||| ||| | || ||||| Sbjct 57658162 GCCTTGTGGTGGTACTACGTCTCTAAAGGAGTGGAGTATTTAGACACTGTGTTTTTCATC 57658103 Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789 || | |||||||||||||| || |||||| ||||||| |||||||| | || ||||| Sbjct 57658102 CTGCGCAAGAAATTTAACCAGGTCAGCTTTCTGCACGTCTACCACCACTGCACAATGTTC 57658043 Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || | | ||||| || || || ||| | || ||||| || Sbjct 57658042 ACCCTCTGGTGGATTGGCATCAAGTGGGTGGCTGGAGGGCA 57658002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603166278422240