Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq9 154 1e-32 >seq9 Length=53241385 Score = 154 bits (170), Expect = 1e-32 Identities = 126/153 (82%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 ||||| || || || || ||| |||| ||||| || ||||| | ||||| || ||||| Sbjct 31663874 ATGGCTCTTCCTCCCTGTCACGCCCTGTGCCAGTTTTACGTGTCCAATGGTGAATTGTCC 31663933 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 |||||||||||||| || || |||||||||||| | || ||||| ||||||||||| || Sbjct 31663934 TGCCAGCTCTATCAGCGCTCAGGAGACATGGGGCTGGGTGTGCCATTCAACATTGCCAGC 31663993 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || || |||||||| |||||||||||||||||| Sbjct 31663994 TATGCGCTGCTCACATACATGATCGCTCATGTC 31664026 Score = 154 bits (170), Expect = 1e-32 Identities = 126/153 (82%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 |||||||||||||||||| |||||||| || || || ||||||||||| ||||| || | Sbjct 31664026 GACATGAGCGATCATGTATGTGAGCAGCGCATAGCTGGCAATGTTGAATGGCACACCCAG 31663967 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||||||| || || ||||||||||||||||||| || ||||| | ||||| || Sbjct 31663966 CCCCATGTCTCCTGAGCGCTGATAGAGCTGGCAGGACAATTCACCATTGGACACGTAAAA 31663907 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 ||||| |||| ||| || || || || ||||| Sbjct 31663906 CTGGCACAGGGCGTGACAGGGAGGAAGAGCCAT 31663874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448251608082720