Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1926 100 7e-16 >seq1926 Length=16330 Score = 100 bits (110), Expect = 7e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| |||| || ||||| |||| || ||||| ||||| || ||||||||| | || || Sbjct 5639 CCAAATTTATAATGTTATCGTTACAGCACATGCTTTTGTAATAATTTTCTTTATAGTAAT 5698 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || ||||| || || || || || || ||| | || || |||| || || || ||||| Sbjct 5699 ACCAGTTATAATCGGAGGATTTGGCAACTGACTTGTACCCCTAATAATCGGCGCCCCTGA 5758 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 || || || || | | ||||||||||| || ||| | || || || || || |||| Sbjct 5759 CATAGCCTTCCCCCGAATAAACAATATAAGCTTCTGACTTCTCCCACCCTCATTTCTTCT 5818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192501772056644