Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepisosteus_20oculatus_20[refseq_20GCF_5F000242695.1_202012-01-13] 1,926 sequences; 945,878,036 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 seq7 86.0 7e-12 >seq1 Length=69065196 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || |||||||| || || || || || | |||||||| | |||| || || Sbjct 49401941 TCATCTCTGCTAATCAACTCGTTTGAGAAGGTGAGGCCTGGCATCAGGCCTCTCTTCTTC 49401882 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| ||||| | ||||||||| || || || || ||||| || || || ||||||||| Sbjct 49401881 AGCCAGAATATGGAAGCAAATGACCCAGAGAAAAAGATACCTTCTACTGCAGCAAAGGCC 49401822 Query 23653 ACAAGACG 23660 |||| ||| Sbjct 49401821 ACAACACG 49401814 >seq7 Length=50812227 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 139424 CAACAGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAA 139483 |||||||||| || || || ||||| ||||| || |||| || ||| | || ||||| | Sbjct 16448875 CAACAGGTGTGCTTCACACCAAATTCTGGATCGTCGATATGAAGCATGTCTACATTGGTA 16448934 Query 139484 GTGCTAACATGGACTGGCGATCACTAACTCAAGTAAA 139520 ||||||||||||||||| | || | ||||| ||||| Sbjct 16448935 GTGCTAACATGGACTGGAGGTCTTTGACTCAGGTAAA 16448971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521475445176400