Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4878 95.1 1e-14 seq255 82.4 8e-11 >seq4878 Length=25969111 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/133 (77%), Gaps = 3/133 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || |||| ||| | |||||||||||||| ||||| ||||| ||||| || ||||| Sbjct 11651060 ATGTAGGTATTGATCAACAGGCTGTACATTTCAGAGTGAATGTTTTCCATTGCGATCTGG 11651001 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC-ACGTAGAATCGTTC-CGCTA 17351 || ||||| |||||||||||||| | | ||| |||||| ||| ||||| || ||| Sbjct 11651000 AAACCGTAGAAGCATCGGGCTTCTGTCACTTGGACTTCCTGAGTA-AATCGCTCAACCTA 11650942 Query 17352 GATTTTCGTTCAC 17364 ||||| ||||| Sbjct 11650941 GATTTAAATTCAC 11650929 >seq255 Length=1984256 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||| ||||| || || | || | ||||||||| |||| ||||| Sbjct 640791 CCTCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGACCTCTTTTCT 640850 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | ||||| | || || || || || ||||| ||||| || || || || | ||||| | Sbjct 640851 TCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACCGCAGCAAAAG 640910 Query 17106 CGATTAATCGTTC 17118 | | |||||| || Sbjct 640911 CTACTAATCGCTC 640923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517513977963840