Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4867 91.5 1e-13 >seq4867 Length=22528368 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || ||||| ||||| || |||||||||||||| |||||||| || || || |||||||| Sbjct 19258917 TTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACTGGGCCCAGGTCTCCTTCC 19258858 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 || | ||| ||| ||| |||||| | ||| || || ||||| |||||||| || Sbjct 19258857 TCACGATCAGTAAAGCCATTTTTATCCAGAAACTCCCTGGAGCCATTAGCATCCCAGAT- 19258799 Query 102155 TGCACGCCAGCTGCTGATAGCTCTTTG 102181 | || || | ||| ||||||||| Sbjct 19258798 TCTACACCGTTTTGTGACAGCTCTTTG 19258772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361229679362888