Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4869 91.5 2e-13 >seq4869 Length=19992947 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 97180 TGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGG 97239 ||||| | |||||| | | ||||| ||||||||| || || ||||| || ||||||| Sbjct 3228470 TGTGGCATGCCATCATTGAGTCTCAGACAGAGACTGGCACACCCTACATGCTTTACAAGG 3228411 Query 97240 ATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGT 97299 | || || ||||| |||||||| | || ||||||||||||| | || |||| Sbjct 3228410 ACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGTAACCTGT 3228351 Query 97300 GCACGGAAATTGTAGAGTACGCC 97322 |||| || || ||||||||| || Sbjct 3228350 GCACAGAGATAGTAGAGTACACC 3228328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741013921282880