Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4869 82.4 6e-11 >seq4869 Length=19992947 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/214 (69%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC-- 18889 ||||| ||||| || ||||| || || || ||||| || | || ||| |||||| Sbjct 16670762 CACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGTGT----GCGTCCAT 16670707 Query 18890 --TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGT 18947 ||||||||||| || ||| | || || |||||||| || ||| | ||| ||||||| Sbjct 16670706 CTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGT 16670647 Query 18948 CGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGG 19007 | || || || || | | | || |||| ||||| |||| ||| |||| Sbjct 16670646 CCTGGATCTTTGCCTTGACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGG 16670587 Query 19008 TTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 | || ||||| || || ||||| || || ||||| Sbjct 16670586 TCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 16670553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414548102861872