Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4869 87.8 1e-12 >seq4869 Length=19992947 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/238 (68%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 33136 ATCTTCACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTA 33195 |||| ||| ||||| | |||| ||||| |||||| || |||||||| || || ||||| Sbjct 16670786 ATCTGAACCTCCTCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTA 16670727 Query 33196 ATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTC 33255 || |||| || || || |||| || || ||| ||| || | | |||||||| Sbjct 16670726 GTCGGACAGTGTGCGTCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTC 16670667 Query 33256 CGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTT 33312 | ||| ||||||||||| || | | | ||| || || | | ||| |||||| | Sbjct 16670666 AGGGGGAATGCCTTCTTTGTCCTGGATCTTTGCC---TTGACATTCTCAATGGTGTCGCT 16670610 Query 33313 GGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || | || || || || || || || || || | || || ||||| || |||||| Sbjct 16670609 TGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 16670552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318758609621424