Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4869 100 7e-16 seq898 84.2 6e-11 >seq4869 Length=19992947 Score = 100 bits (110), Expect = 7e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| || | ||| ||||||||| || || |||| ||||| || |||||||| ||| Sbjct 3228480 GCTCAGCAGGTGTGGCATGCCATCATTGAGTCTCAGACAGAGACTGGCACACCCTACATG 3228421 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| || | |||||||||||| |||||||||| |||| || || || | Sbjct 3228420 CTTTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCC 3228361 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 || ||||| || || ||||| | || |||||| || ||| ||| Sbjct 3228360 AGTAACCTGTGCACAGAGATAGTAGAGTACACCAGTCACGATGAG 3228316 >seq898 Length=903892 Score = 84.2 bits (92), Expect = 6e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 111672 ATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA 111731 |||||| | || || || ||| | |||||||||||||| ||||| | | || Sbjct 821850 ATGGCATTGCCCCCCTGCCATGCGTTATGCCAGTTTTATGTGTCAGACGGTGAGTTGTCG 821909 Query 111732 TGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGT 111791 ||||| |||| ||||| |||| ||| || ||||| ||||| || || || ||||| || Sbjct 821910 TGCCAGCTGTACCAGCGCTCTGGTGACATGGGTCTGGGTGTGCCATTCAACATTGCCAGC 821969 Query 111792 TACGCACTACTTAC 111805 ||||||||||| || Sbjct 821970 TACGCACTACTCAC 821983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303271974222416