Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4869 107 2e-18 seq4867 104 2e-17 >seq4869 Length=19992947 Score = 107 bits (118), Expect = 2e-18 Identities = 165/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||| |||| ||||| |||||||| || || ||||||||||||| | Sbjct 16670779 CCTCCTCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 16670720 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || |||||| |||| |||||||| ||| | || |||| ||| ||||| Sbjct 16670719 AGTGT----GCGTCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 16670664 Query 16825 AGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 || | ||| |||||||| || ||||| ||| || | | | ||||||| ||| Sbjct 16670663 GGGAATGCCTTCTTTGTCCTGGATCTTTGC--CTTGACATTCTCAATGGTGTCGCTTGGC 16670606 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || | ||||||||| || || |||| || ||||| || |||||||| Sbjct 16670605 TCGACCTCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 16670553 Score = 98.7 bits (108), Expect = 8e-16 Identities = 163/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | || | ||| |||| ||||| |||||||| || || ||||||||||||| | Sbjct 16670551 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGAATGTTGTAGTCGGAC 16670492 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || |||||| |||| |||||||| ||| | || | || ||| ||||| Sbjct 16670491 AGTGT----GCGTCCATCTTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGGTCAGG 16670436 Query 16825 AGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 || | ||| |||||||| || || || |||||| | | | ||||| | ||| Sbjct 16670435 GGGAATGCCTTCTTTGTCCTGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTTGGC 16670378 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || | ||||||||| || || || || || |||||||| |||||||| Sbjct 16670377 TCGACCTCAAGGGTGATGGTCTTACCAGTTAGGGTCTTGACAAAGATCTGCAT 16670325 >seq4867 Length=22528368 Score = 104 bits (114), Expect = 2e-17 Identities = 157/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||||||||| || ||||||||||||| || || |||||| Sbjct 1268984 AGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGT----GCGTCC 1268929 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 ||||| ||||| || || | || || ||||| ||||| ||| | ||| || || Sbjct 1268928 ATCTTCCAACTGTTTACCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTT 1268869 Query 16840 GTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897 ||| || || || ||| || | | | ||||||| |||||| || | ||| Sbjct 1268868 GTCCTGGATCTTAGC--CTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGAGTG 1268811 Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 ||||| || || |||||||| || ||||| |||||||| || Sbjct 1268810 ATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCATCTT 1268770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405063867895120