Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4869 131 1e-25 >seq4869 Length=19992947 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| ||||||| | || || ||| | | Sbjct 16670325 ATGCAGATCTTTGTCAAGACCCTAACTGGTAAGACCATCACCCTTGAGGTCGAGCCAAGT 16670384 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| || ||| ||||||||||| ||||| |||||||| Sbjct 16670385 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 16670444 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| |||||||| | ||||||| ||||| || ||| ||||| Sbjct 16670445 CAGAGGTTGATCTTTGCTGGCAAACAGCTGGAAGATGGACGCACACTGTCCGACTACAAC 16670504 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| ||||| | ||| | ||||| | || || ||||| Sbjct 16670505 ATTCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGGGGAGG 16670551 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| |||| || ||| | Sbjct 16670553 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 16670612 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| ||| ||| ||||||||||| ||||| |||||||| Sbjct 16670613 GACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 16670672 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| |||||||| | ||||||| ||||| || ||| ||||| Sbjct 16670673 CAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGACGCACACTGTCCGACTACAAC 16670732 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| | ||| | ||||| | || |||||||| Sbjct 16670733 ATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAGAGGAGG 16670779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433302185567720