Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4878 91.5 2e-13 >seq4878 Length=25969111 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/132 (76%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| |||| ||| ||||| ||||||||||| || | || |||||||| || ||| Sbjct 11651060 ATGTAGGTATTGATCAACAGGCTGTACATTTCAGAGTGAATGTTTTCCATTGCGATCTGG 11651001 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTA-CGAG 93480 || |||||||| |||| ||||| || | || ||||| |||| ||||| ||| | | || Sbjct 11651000 AAACCGTAGAAGCATCGGGCTTCTGTCACTTGGACTTCCTGAGTAAATCGCTCAACCTAG 11650941 Query 93481 ATTTTCATTGAC 93492 |||| ||| || Sbjct 11650940 ATTTAAATTCAC 11650929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556826775805120