Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4869 84.2 2e-11 >seq4869 Length=19992947 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 146069 CCACCTGAAACTCGCCGGCGAGAACGC-GCCTCAGATACACGTTGCTGGTGAACGGCTCG 146127 ||||||||||||| || | ||||| | || | | || | |||||||||| | |||||| Sbjct 3226600 CCACCTGAAACTCTCCAGACAGAACTCTGCGTGTG-TAGATGTTGCTGGTGTAGGGCTCG 3226658 Query 146128 AACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGC 146187 | ||||||||||| || || ||||| || || | ||| || |||||| |||| |||| Sbjct 3226659 ATTGACTCGTTGTTGCCCAGGATCTGAGCTGTGGAAGCAGTGGGCATGGGAGCCAGCAGC 3226718 Query 146188 AAAGAGTTTCTCACGCCGTGTCT 146210 | | ||| | ||| || || || Sbjct 3226719 AGACTGTTACGCACACCATGCCT 3226741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475471746901120