Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4869 89.7 6e-13 >seq4869 Length=19992947 Score = 89.7 bits (98), Expect = 6e-13 Identities = 116/159 (73%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTC---TTAATCGT 106548 |||||| | | |||||||||| || ||||| |||| ||| ||| || || || Sbjct 3228316 CTCATCGTGACTGGTGTACTCTACTATCTCTGTGCACAGGTT---ACTGGATTTGATGGT 3228372 Query 106549 CCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 106608 |||| |||| ||||| ||||| |||||| || |||||||| ||||||||||| || Sbjct 3228373 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAAAGCATGTAGGGTGT 3228432 Query 106609 CCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 || ||||| ||||| |||| | || || | |||||| Sbjct 3228433 GCCAGTCTCTGTCTGAGACTCAATGATGGCATGCCACAC 3228471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589944752173120