Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq4872 107 2e-18 >seq4872 Length=27116566 Score = 107 bits (118), Expect = 2e-18 Identities = 181/262 (69%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 160699 GCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGT 160758 |||| ||| |||||| || || || || || || || |||||| ||||| | || | Sbjct 24302506 GCAGATCCTGCATGCAGTTGATGTCCGCTTGAACTCGAGACCAGGAGGCGTATATCACAT 24302565 Query 160759 TCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCA 160818 |||| ||||| ||||||||||| ||||| | || ||||| || || || || Sbjct 24302566 TCTCCAGTTTGCTGGCCACAAACACGTTGGTCAGGCAGGACACAATGGCCCTAACTGCTT 24302625 Query 160819 GAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGT 160878 || |||| | | ||| ||||||| || || || |||| || | ||| || Sbjct 24302626 CTTTAAAGATCTCAGGTGACTTCTGGTCCACATGAACACAGTACACATTGTCAGGAATGT 24302685 Query 160879 AGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGG 160938 | |||||||| | | ||| || |||||||| ||||| | |||||||| || ||||| | Sbjct 24302686 AAATGGCCCTTAAGAGCCTTTCAAACATCTCAATCTTCTCGTGGATCACAATTGAGTAAG 24302745 Query 160939 CTATCGGAAACTCGGTCTCCTC 160960 | || || || || ||||||| Sbjct 24302746 CAATGGGGAAATCTTTCTCCTC 24302767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577183931906880