Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4878 91.5 3e-13 >seq4878 Length=25969111 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | || ||||||||| || ||||| || |||||||| || |||| | |||| Sbjct 11651501 AGAGTGGTGGCTTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGGTCTTTTGCTTCTATT 11651560 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 || ||||| |||||| | ||| | |||||||||||| | || |||||| || ||||| Sbjct 11651561 TTCTGGCTAAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTCATCAGC 11651620 Query 131978 AGAGATGA 131985 |||||||| Sbjct 11651621 AGAGATGA 11651628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186738472881368