Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq4880 100 9e-18 seq4888 98.7 3e-17 seq4886 98.7 3e-17 seq4873 89.7 2e-14 >seq4880 Length=21574968 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1378743 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 1378802 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1378803 CCCGGGTTTCGGC 1378815 >seq4888 Length=31417778 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 15270642 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 15270583 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 15270582 CCGGGTTTCGGC 15270571 >seq4886 Length=30003503 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1074274 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1074215 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1074214 CCGGGTTTCGGC 1074203 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||| ||||||||| | | Sbjct 14209951 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGGCCCTGGTTCGATC 14210010 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 14210011 CCGGGTTTCGGC 14210022 >seq4873 Length=17659128 Score = 89.7 bits (98), Expect = 2e-14 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||| | Sbjct 10801901 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTTTAGGTCCCTGGTTCGA 10801842 Query 2827 CCCCGGGCTTCAGC 2840 | |||| ||| || Sbjct 10801841 TCTCGGGTTTCGGC 10801828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848752640760