Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq898 111 1e-19 >seq898 Length=903892 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 |||||||||| ||||| | ||||| ||||| | | ||||| || || || | | Sbjct 821838 GATCTCCCTCGCATGGCATTGCCCCCCTGCCATGCGTTATGCCAGTTTTATGTGTCAGAC 821897 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||| |||| |||||||| || || || || || |||||||| | || ||||| ||| Sbjct 821898 GGTGAGTTGTCGTGCCAGCTGTACCAGCGCTCTGGTGACATGGGTCTGGGTGTGCCATTC 821957 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 |||||||| || ||||| || ||||| |||||||| || || Sbjct 821958 AACATTGCCAGCTACGCACTACTCACCTACATGATTGCCCA 821998 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||||| ||||| || ||||| || ||||||||||| ||||| || | ||| Sbjct 821998 TGGGCAATCATGTAGGTGAGTAGTGCGTAGCTGGCAATGTTGAATGGCACACCCAGACCC 821939 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| || || || || || |||||||| |||| ||| || | | || || || ||| Sbjct 821938 ATGTCACCAGAGCGCTGGTACAGCTGGCACGACAACTCACCGTCTGACACATAAAACTGG 821879 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || | | ||||| ||||| | ||||| |||||||||| Sbjct 821878 CATAACGCATGGCAGGGGGGCAATGCCATGCGAGGGAGATC 821838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448235011167360