Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq898 87.8 1e-12 seq4872 86.0 5e-12 >seq898 Length=903892 Score = 87.8 bits (96), Expect = 1e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| ||||||||||| || | | ||||||||| | || || || Sbjct 822010 AGTCCAGTGATGTGGGCAATCATGTAGGTGAGTAGTGCGTAGCTGGCAATGTTGAATGGC 821951 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||||||||||||| | || | |||||||| ||||| || | ||| |||| || Sbjct 821950 ACACCCAGACCCATGTCACCAGAGCGCTGGTACAGCTGGCACGACAACTCACCGTCTGAC 821891 Query 118654 ACATAAAACTG 118664 ||||||||||| Sbjct 821890 ACATAAAACTG 821880 >seq4872 Length=27116566 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 3250 TGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGG 3309 ||| |||||||| |||| | || ||||||||||| || || |||||||| |||||||| Sbjct 11670954 TGAAGAGCTCTTTAGAGACGAAGTGAACTGGGGGCGGATCGTGGCTTTCTTCGAGTTTGG 11670895 Query 3310 TGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGC 3369 || ||||| ||||| |||||||| | | || | |||| || || | ||||| Sbjct 11670894 CGGGACCATGTGCGTGGAGAGCGTCAACCGGGAGATGGCGTCCCAGGTAGATAGTATTGC 11670835 Query 3370 CGCGTGGATGACAGACCAGCTG 3391 |||||||||||| | ||| Sbjct 11670834 ACACTGGATGACAGACTACCTG 11670813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414452108580832