Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leuciscus_20waleckii_20[genbank_20GCA_5F900092035.1_202016-06-28] 4,888 sequences; 752,538,629 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4867 96.9 3e-15 >seq4867 Length=22528368 Score = 96.9 bits (106), Expect = 3e-15 Identities = 123/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| || ||||| || |||||||| || || || ||||| || |||||||| Sbjct 19258924 CATGTCATTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACTGGGCCCAGGTC 19258865 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||| || || | | ||||| | || |||| ||| || ||||| || || || || Sbjct 19258864 TCCTTCCTCACGATCAGTAAAGCCATTTTTATCCAGAAACTCCCTGGAGCCATTAGCATC 19258805 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| | ||| || || | || |||||||||| ||||| || || Sbjct 19258804 CCAGAT-TCTACACCGTTTTGTGACAGCTCTTTGGCATTTGTTGAACC 19258758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369485187532328