Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq112 167 3e-36 >seq112 Length=268450 Score = 167 bits (184), Expect = 3e-36 Identities = 143/177 (81%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 ||| || |||| ||| |||| ||||||||| || || | ||||||||||| ||||| || Sbjct 20155 GAGTCCTGTGATGTGTGCGATCATGTAGGTAAGAAGTGCATAGCTGGCTATATTGAAAGG 20214 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGC 145868 ||||||||| ||||| || ||||| |||||||||||||| || || ||||| || | Sbjct 20215 CACCCCCAGGCCCATATCACCCGAACGCTGGTACAGCTGACACGACAGCTCACCATCACA 20274 Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| |||||| ||||||||| ||||| |||||| |||||||| || Sbjct 20275 CACGTAGAACTGACACAGGGCGTGGCAGGGGGGCAGAGCCATGAGAGGCAGGTCTGC 20331 Score = 98.7 bits (108), Expect = 1e-15 Identities = 112/150 (75%), Gaps = 8/150 (5%) Strand=Plus/Plus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| |||| || ||||||||||||||||| || || || || |||||||| || ||| Sbjct 21406 GTACTCGGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCCAGGTCGCCTTCCTC 21465 Query 146100 CCTGTGCCCCAGCCCGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155 || | ||| ||| || | ||||||||||||||||| ||||| ||||| | Sbjct 21466 TCTAT----CAGTGAAGCCAAGGTTGTCCAGGAAGTCCCGGGACCCATTGGCATCCCAAA 21521 Query 146156 TCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||| || || |||| |||||||| |||| Sbjct 21522 TCTTTACCCCTTTCGCCGAGAGCTCCTTGG 21551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589942572279920