Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq2073 105 8e-18 >seq2073 Length=72296 Score = 105 bits (116), Expect = 8e-18 Identities = 179/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||||||||||||| | ||| || || ||| || | || Sbjct 61545 GAACTTCTCGAAGTTCCAGGCCACGTCGTTCCTGCAGACCGGGCTCCACATGATCAACTT 61486 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 ||||||| ||| ||| | | |||||||| || || || | || | ||||| Sbjct 61485 GGGGTCGGTCATGAGGGCGGCTGGCTCGTCGCTGGGGAATGGGAGAGATTCCCTCAGGAA 61426 Query 83263 GGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCAC-TTCTCGAAGAGCATAAA 83319 | || || || || || |||| ||||| || || ||| ||||| | |||| ||| Sbjct 61425 CACAAACAGGGGGTGGGCATCCTT--CCCGTTCACGTC-CACTTTCTCCAGGAGCTGAAA 61369 Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 || |||||||||||||| || ||||||| || |||||| || | ||| || |||| Sbjct 61368 CTTTGGCTCGAAGCCGTTTCCGGGACGGATGTACTTCAGAGATATGAGGATTTCTTCATT 61309 Query 83380 CTGGGCGTTTTCCTG 83394 || ||| ||||| Sbjct 61308 CTTACAGTTCTCCTG 61294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608658313947920