Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2467 93.3 8e-14 >seq2467 Length=72583 Score = 93.3 bits (102), Expect = 8e-14 Identities = 104/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 51920 AAGGG-ATAGAATACTTGGATACGGTATTTTTCATACTTAGGAAAAAATTTAATCAGGTT 51978 ||||| || || || |||| || || |||||||| || ||||||||||| || |||||| Sbjct 5110 AAGGGCATCGAGTATCTGGACACAGTGTTTTTCATCCTGAGGAAAAAATTCAACCAGGTT 5169 Query 51979 AGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTAGGATGGATAGGTATTAAA 52038 | ||| || ||||| || || || | || ||||| || || | ||||| || || ||| Sbjct 5170 ACTTTCCTGCACGTCTACCACCACTGCACCATGTTCACGCTCTGGTGGATCGGCATCAAA 5229 Query 52039 TGGTTTGCTGGAGGTCAG 52056 ||| | || ||||| ||| Sbjct 5230 TGGGTGGCAGGAGGACAG 5247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922986795807920